Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB4Q9UN71 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 RNA5SP416-201ENST00000516838 111 ntBASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGB4Q9UN71 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHGB4Q9UN71 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 AC067750.1-201ENST00000608826 6545 ntBASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 PDPK2P-202ENST00000562415 1191 ntBASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGB4Q9UN71 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGB4Q9UN71 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms