Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AC142381.1-201ENST00000426099 345 ntBASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AC093028.1-201ENST00000622998 982 ntBASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 LINC00628-201ENST00000628516 1289 ntBASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AC073439.1-201ENST00000624121 1774 ntBASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 AC067930.6-201ENST00000623257 4947 ntBASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 RBPMS2P1-201ENST00000437762 623 ntBASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CNOT11Q9UKZ1 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.08■□□□□ 0.01
CNOT11Q9UKZ1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CNOT11Q9UKZ1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.08■□□□□ 0.01
CNOT11Q9UKZ1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CNOT11Q9UKZ1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
CNOT11Q9UKZ1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CNOT11Q9UKZ1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.08■□□□□ 0.01
CNOT11Q9UKZ1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CNOT11Q9UKZ1 FOXO1B-201ENST00000504678 1527 ntBASIC15.08■□□□□ 0.01
CNOT11Q9UKZ1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms