Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 MARK2P5-201ENST00000507649 634 ntBASIC19.63■□□□□ 0.73
SCN11AQ9UI33 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 AC091544.8-201ENST00000619490 361 ntBASIC19.63■□□□□ 0.73
SCN11AQ9UI33 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN11AQ9UI33 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AL160314.3-201ENST00000556041 767 ntBASIC19.62■□□□□ 0.73
SCN11AQ9UI33 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 FKBP4P6-201ENST00000457486 1332 ntBASIC19.62■□□□□ 0.73
SCN11AQ9UI33 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 CICP11-201ENST00000434745 2827 ntBASIC19.62■□□□□ 0.73
SCN11AQ9UI33 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AC007274.2-201ENST00000421675 662 ntBASIC19.62■□□□□ 0.73
SCN11AQ9UI33 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AC068587.8-201ENST00000641239 219 ntBASIC19.62■□□□□ 0.73
SCN11AQ9UI33 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AC008132.1-202ENST00000342005 1389 ntBASIC19.62■□□□□ 0.73
SCN11AQ9UI33 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN11AQ9UI33 AC112693.3-201ENST00000624819 1983 ntBASIC19.62■□□□□ 0.73
SCN11AQ9UI33 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 AL359258.3-201ENST00000622910 2331 ntBASIC19.61■□□□□ 0.73
SCN11AQ9UI33 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 CYP46A4P-201ENST00000414953 267 ntBASIC19.61■□□□□ 0.73
SCN11AQ9UI33 ACTG1P2-201ENST00000415776 1125 ntBASIC19.61■□□□□ 0.73
SCN11AQ9UI33 ACTG1P11-201ENST00000425411 1125 ntBASIC19.61■□□□□ 0.73
SCN11AQ9UI33 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms