Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 KRT18P28-201ENST00000453838 1332 ntBASIC12.98□□□□□ -0.33
CALYQ9NYX4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 AC027369.6-201ENST00000525520 931 ntBASIC12.98□□□□□ -0.33
CALYQ9NYX4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 AL512361.1-201ENST00000554200 418 ntBASIC12.98□□□□□ -0.33
CALYQ9NYX4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 AC025048.3-201ENST00000590609 569 ntBASIC12.98□□□□□ -0.33
CALYQ9NYX4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 AC005702.4-201ENST00000618393 416 ntBASIC12.98□□□□□ -0.33
CALYQ9NYX4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 Z97205.2-201ENST00000564697 1639 ntBASIC12.98□□□□□ -0.33
CALYQ9NYX4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CALYQ9NYX4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CALYQ9NYX4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 AC006486.2-201ENST00000624246 2199 ntBASIC12.97□□□□□ -0.33
CALYQ9NYX4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 AC007326.2-201ENST00000624224 7579 ntBASIC12.97□□□□□ -0.33
CALYQ9NYX4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 AL158211.3-201ENST00000607385 239 ntBASIC12.97□□□□□ -0.33
CALYQ9NYX4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.97□□□□□ -0.33
CALYQ9NYX4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CALYQ9NYX4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms