Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 AL009183.1-201ENST00000603760 355 ntBASIC14.36□□□□□ -0.11
CLN6Q9NWW5 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 REXO1L1P-202ENST00000608646 1974 ntBASIC14.36□□□□□ -0.11
CLN6Q9NWW5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLN6Q9NWW5 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 CICP4-201ENST00000447359 2812 ntBASIC14.35□□□□□ -0.11
CLN6Q9NWW5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 AL691432.1-201ENST00000596308 1422 ntBASIC14.35□□□□□ -0.11
CLN6Q9NWW5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 AC108751.1-201ENST00000490852 363 ntBASIC14.35□□□□□ -0.11
CLN6Q9NWW5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLN6Q9NWW5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 BNIP3P1-202ENST00000550043 1585 ntBASIC14.34□□□□□ -0.11
CLN6Q9NWW5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 AC092474.2-201ENST00000424288 719 ntBASIC14.34□□□□□ -0.11
CLN6Q9NWW5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 FAM8A3P-201ENST00000427218 844 ntBASIC14.34□□□□□ -0.11
CLN6Q9NWW5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.34□□□□□ -0.11
CLN6Q9NWW5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms