Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 LINC00552-201ENST00000625151 2579 ntBASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 WASH3P-207ENST00000560956 1394 ntBASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 FO538757.1-201ENST00000623083 1397 ntBASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 MIR346-201ENST00000362234 95 ntBASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 LBH-204ENST00000406087 559 ntTSL 4 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 AL355306.1-201ENST00000415580 579 ntBASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 RN7SL589P-201ENST00000481268 310 ntBASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 HNRNPUP1-201ENST00000554987 333 ntBASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 AJ011931.1-201ENST00000618749 2492 ntBASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 SNX18-202ENST00000343017 3140 ntBASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 RPL13AP23-201ENST00000480739 586 ntBASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 AP000842.3-202ENST00000569238 1080 ntBASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms