Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TOMM22P5-201ENST00000416399 439 ntBASIC14.97□□□□□ -0.01
BRF2Q9HAW0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 SDHAP3-202ENST00000515467 728 ntBASIC14.97□□□□□ -0.01
BRF2Q9HAW0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 AL691403.2-201ENST00000618460 490 ntBASIC14.97□□□□□ -0.01
BRF2Q9HAW0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AGAP7P-201ENST00000582299 2062 ntBASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AGAP14-201ENST00000624701 2060 ntBASIC14.96□□□□□ -0.01
BRF2Q9HAW0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AC107890.1-201ENST00000422478 521 ntBASIC14.96□□□□□ -0.01
BRF2Q9HAW0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 ZNF890P-202ENST00000530367 1156 ntBASIC14.96□□□□□ -0.01
BRF2Q9HAW0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AC023511.2-201ENST00000618803 211 ntBASIC14.96□□□□□ -0.01
BRF2Q9HAW0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 AL645728.2-202ENST00000641679 227 ntBASIC14.96□□□□□ -0.01
BRF2Q9HAW0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BRF2Q9HAW0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
BRF2Q9HAW0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
BRF2Q9HAW0 WASH3P-207ENST00000560956 1394 ntBASIC14.96□□□□□ -0.02
BRF2Q9HAW0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.96□□□□□ -0.02
BRF2Q9HAW0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.96□□□□□ -0.02
BRF2Q9HAW0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
BRF2Q9HAW0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
BRF2Q9HAW0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
BRF2Q9HAW0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
BRF2Q9HAW0 AC091951.1-201ENST00000512854 2465 ntBASIC14.95□□□□□ -0.02
BRF2Q9HAW0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AC087499.5-201ENST00000452760 1342 ntBASIC14.95□□□□□ -0.02
BRF2Q9HAW0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms