Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPF2Q9HAU5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 AL450472.2-201ENST00000603663 1156 ntBASIC19.29■□□□□ 0.68
UPF2Q9HAU5 AL121912.1-201ENST00000603683 238 ntBASIC19.29■□□□□ 0.68
UPF2Q9HAU5 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
UPF2Q9HAU5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 GRK6P1-201ENST00000400595 1711 ntBASIC19.28■□□□□ 0.68
UPF2Q9HAU5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 AL359258.3-201ENST00000622910 2331 ntBASIC19.28■□□□□ 0.68
UPF2Q9HAU5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 AC087386.2-201ENST00000623212 4637 ntBASIC19.28■□□□□ 0.68
UPF2Q9HAU5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 AJ011931.1-201ENST00000618749 2492 ntBASIC19.28■□□□□ 0.68
UPF2Q9HAU5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
UPF2Q9HAU5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPF2Q9HAU5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms