Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 AC138028.6-201ENST00000616106 1482 ntBASIC18.23■□□□□ 0.51
EFCC1Q9HA90 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 AC005077.2-201ENST00000449786 690 ntBASIC18.23■□□□□ 0.51
EFCC1Q9HA90 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 UPF3AP2-201ENST00000457924 1132 ntBASIC18.23■□□□□ 0.51
EFCC1Q9HA90 AC093433.1-201ENST00000458048 571 ntBASIC18.23■□□□□ 0.51
EFCC1Q9HA90 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 SCARNA20.5-201ENST00000516991 142 ntBASIC18.23■□□□□ 0.51
EFCC1Q9HA90 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 AC120045.2-201ENST00000567334 178 ntBASIC18.23■□□□□ 0.51
EFCC1Q9HA90 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EFCC1Q9HA90 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 AC007950.2-201ENST00000615045 2347 ntBASIC18.22■□□□□ 0.51
EFCC1Q9HA90 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 BTBD6P1-201ENST00000412176 1267 ntBASIC18.22■□□□□ 0.51
EFCC1Q9HA90 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 POU5F1P6-201ENST00000466990 990 ntBASIC18.22■□□□□ 0.51
EFCC1Q9HA90 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 MIR4722-201ENST00000578292 60 ntBASIC18.22■□□□□ 0.51
EFCC1Q9HA90 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EFCC1Q9HA90 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 FNTAP2-201ENST00000430308 634 ntBASIC18.21■□□□□ 0.51
EFCC1Q9HA90 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 EIF4HP1-201ENST00000453115 687 ntBASIC18.21■□□□□ 0.51
EFCC1Q9HA90 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EFCC1Q9HA90 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
EFCC1Q9HA90 AC105917.1-201ENST00000506637 2539 ntBASIC18.2■□□□□ 0.5
EFCC1Q9HA90 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.2■□□□□ 0.5
EFCC1Q9HA90 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms