Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 AC007292.2-201ENST00000593524 1812 ntBASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J3Q9H1A7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 C20orf181-201ENST00000623918 480 ntBASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
POLR2J3Q9H1A7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
POLR2J3Q9H1A7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 RPL5P21-201ENST00000404620 815 ntBASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 AC136604.1-201ENST00000418535 575 ntBASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 KRT8P48-201ENST00000515599 1220 ntBASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms