Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 TNRC18P2-201ENST00000417666 2714 ntBASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 AC135586.1-201ENST00000539323 574 ntBASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 AL158212.4-201ENST00000624062 1286 ntBASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 AGAP7P-201ENST00000582299 2062 ntBASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 AGAP14-201ENST00000624701 2060 ntBASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.47■□□□□ 0.39
CCSER1Q9C0I3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 BASP1P1-201ENST00000430708 665 ntBASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 AL589987.1-201ENST00000453380 819 ntBASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCSER1Q9C0I3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCSER1Q9C0I3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms