Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM6Q9C030 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM6Q9C030 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 AC074338.1-201ENST00000416825 156 ntBASIC17.24■□□□□ 0.35
TRIM6Q9C030 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 INE1-201ENST00000456273 945 ntBASIC17.24■□□□□ 0.35
TRIM6Q9C030 ELK1P1-201ENST00000485699 580 ntBASIC17.24■□□□□ 0.35
TRIM6Q9C030 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 HNRNPUP1-201ENST00000554987 333 ntBASIC17.24■□□□□ 0.35
TRIM6Q9C030 AL158212.4-201ENST00000624062 1286 ntBASIC17.24■□□□□ 0.35
TRIM6Q9C030 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 AC018892.3-201ENST00000623986 2499 ntBASIC17.24■□□□□ 0.35
TRIM6Q9C030 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM6Q9C030 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM6Q9C030 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM6Q9C030 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM6Q9C030 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRIM6Q9C030 AC011477.6-201ENST00000604980 1927 ntBASIC17.23■□□□□ 0.35
TRIM6Q9C030 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM6Q9C030 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM6Q9C030 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM6Q9C030 GK-202ENST00000378941 458 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM6Q9C030 AL512384.1-201ENST00000406683 331 ntBASIC17.23■□□□□ 0.35
TRIM6Q9C030 AC136604.1-201ENST00000418535 575 ntBASIC17.23■□□□□ 0.35
TRIM6Q9C030 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM6Q9C030 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM6Q9C030 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM6Q9C030 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms