Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 AC117489.1-201ENST00000625169 3217 ntBASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 AC142381.1-201ENST00000426099 345 ntBASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 AL121912.1-201ENST00000603683 238 ntBASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 MIR7706-201ENST00000613747 67 ntBASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 AC097359.2-201ENST00000604992 2389 ntBASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.24□□□□□ -0.13
GABARAPL3Q9BY60 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 KRT19P2-202ENST00000557173 1012 ntBASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABARAPL3Q9BY60 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AC092135.3-201ENST00000624151 1846 ntBASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms