Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 AL513523.2-202ENST00000427283 2040 ntBASIC14.15□□□□□ -0.14
USB1Q9BQ65 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 AL592424.1-201ENST00000563624 1536 ntBASIC14.15□□□□□ -0.14
USB1Q9BQ65 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.15□□□□□ -0.14
USB1Q9BQ65 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
USB1Q9BQ65 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
USB1Q9BQ65 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.15□□□□□ -0.15
USB1Q9BQ65 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
USB1Q9BQ65 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
USB1Q9BQ65 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
USB1Q9BQ65 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
USB1Q9BQ65 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.15□□□□□ -0.15
USB1Q9BQ65 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 AC087821.1-201ENST00000623639 567 ntBASIC14.14□□□□□ -0.15
USB1Q9BQ65 AC008761.3-201ENST00000624803 892 ntBASIC14.14□□□□□ -0.15
USB1Q9BQ65 AL358472.5-202ENST00000641448 1267 ntBASIC14.14□□□□□ -0.15
USB1Q9BQ65 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
USB1Q9BQ65 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
USB1Q9BQ65 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 AC092364.2-201ENST00000596710 2692 ntBASIC14.13□□□□□ -0.15
USB1Q9BQ65 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.13□□□□□ -0.15
USB1Q9BQ65 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
USB1Q9BQ65 RPL37AP1-201ENST00000412502 279 ntBASIC14.13□□□□□ -0.15
USB1Q9BQ65 MTND2P9-201ENST00000422293 931 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms