Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV9Q99603 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV9Q99603 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TRGV9Q99603 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TRGV9Q99603 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRGV9Q99603 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.25□□□□□ -0.45
TRGV9Q99603 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.25□□□□□ -0.45
TRGV9Q99603 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.24□□□□□ -0.45
TRGV9Q99603 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV9Q99603 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV9Q99603 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
TRGV9Q99603 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV9Q99603 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV9Q99603 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV9Q99603 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV9Q99603 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.24□□□□□ -0.45
TRGV9Q99603 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.24□□□□□ -0.45
TRGV9Q99603 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
TRGV9Q99603 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TRGV9Q99603 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV9Q99603 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.24□□□□□ -0.45
TRGV9Q99603 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.24□□□□□ -0.45
TRGV9Q99603 RARRES2P9-201ENST00000565168 469 ntBASIC12.24□□□□□ -0.45
TRGV9Q99603 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 UXT-AS1-201ENST00000590504 1525 ntBASIC12.24□□□□□ -0.45
TRGV9Q99603 LINC00528-201ENST00000600723 2160 ntBASIC12.24□□□□□ -0.45
TRGV9Q99603 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 AC055717.3-201ENST00000622967 595 ntBASIC12.24□□□□□ -0.45
TRGV9Q99603 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.24□□□□□ -0.45
TRGV9Q99603 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRGV9Q99603 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV9Q99603 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV9Q99603 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TRGV9Q99603 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV9Q99603 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV9Q99603 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV9Q99603 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 FO393414.2-201ENST00000405153 598 ntBASIC12.23□□□□□ -0.45
TRGV9Q99603 AL353705.2-201ENST00000428243 662 ntBASIC12.23□□□□□ -0.45
TRGV9Q99603 TIMM8BP1-201ENST00000452384 211 ntBASIC12.23□□□□□ -0.45
TRGV9Q99603 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
TRGV9Q99603 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 SLC25A39P2-201ENST00000537614 270 ntBASIC12.23□□□□□ -0.45
TRGV9Q99603 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.23□□□□□ -0.45
TRGV9Q99603 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV9Q99603 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV9Q99603 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.23□□□□□ -0.45
TRGV9Q99603 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TRGV9Q99603 AC232323.1-201ENST00000540724 2099 ntBASIC12.23□□□□□ -0.45
TRGV9Q99603 REXO1L5P-201ENST00000622260 2098 ntBASIC12.23□□□□□ -0.45
TRGV9Q99603 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.23□□□□□ -0.45
TRGV9Q99603 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRGV9Q99603 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms