Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 AL133267.1-201ENST00000398220 340 ntBASIC18.52■□□□□ 0.56
NEK1Q96PY6 RPL5P21-201ENST00000404620 815 ntBASIC18.52■□□□□ 0.56
NEK1Q96PY6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 AC114501.2-201ENST00000439631 535 ntBASIC18.52■□□□□ 0.56
NEK1Q96PY6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 AC004890.2-204ENST00000481968 304 ntBASIC18.52■□□□□ 0.56
NEK1Q96PY6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 AC148477.4-201ENST00000613430 1793 ntBASIC18.52■□□□□ 0.55
NEK1Q96PY6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
NEK1Q96PY6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NEK1Q96PY6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NEK1Q96PY6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
NEK1Q96PY6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.55
NEK1Q96PY6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.52■□□□□ 0.55
NEK1Q96PY6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.51■□□□□ 0.55
NEK1Q96PY6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 AC023024.2-201ENST00000623561 1993 ntBASIC18.51■□□□□ 0.55
NEK1Q96PY6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 BTBD7P1-201ENST00000447253 1453 ntBASIC18.51■□□□□ 0.55
NEK1Q96PY6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEK1Q96PY6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.51■□□□□ 0.55
NEK1Q96PY6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 MST1L-201ENST00000442552 2185 ntBASIC18.5■□□□□ 0.55
NEK1Q96PY6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEK1Q96PY6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NEK1Q96PY6 AC138969.3-201ENST00000546612 1459 ntBASIC18.5■□□□□ 0.55
NEK1Q96PY6 AC138932.2-201ENST00000548268 1459 ntBASIC18.5■□□□□ 0.55
NEK1Q96PY6 AC126755.4-201ENST00000549796 1459 ntBASIC18.5■□□□□ 0.55
NEK1Q96PY6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms