Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AC008741.2-201ENST00000612792 3115 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 CNN2P8-201ENST00000421872 913 ntBASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 RN7SL190P-201ENST00000582519 257 ntBASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SYNGAP1Q96PV0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SYNGAP1Q96PV0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 AC244093.1-201ENST00000610837 814 ntBASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.71■□□□□ 0.42
SYNGAP1Q96PV0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 AC069224.1-201ENST00000566372 1715 ntBASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms