Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NLRP3Q96P20 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NLRP3Q96P20 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NLRP3Q96P20 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NLRP3Q96P20 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NLRP3Q96P20 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.14■□□□□ 0.66
NLRP3Q96P20 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
NLRP3Q96P20 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 AC138028.6-201ENST00000616106 1482 ntBASIC19.14■□□□□ 0.65
NLRP3Q96P20 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLRP3Q96P20 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 AC099398.1-201ENST00000567919 2776 ntBASIC19.14■□□□□ 0.65
NLRP3Q96P20 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
NLRP3Q96P20 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NLRP3Q96P20 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRP3Q96P20 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRP3Q96P20 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NLRP3Q96P20 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRP3Q96P20 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRP3Q96P20 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 MIR663B-201ENST00000408361 115 ntBASIC19.13■□□□□ 0.65
NLRP3Q96P20 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 AC091804.1-201ENST00000486888 567 ntBASIC19.13■□□□□ 0.65
NLRP3Q96P20 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NLRP3Q96P20 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NLRP3Q96P20 AL158070.2-201ENST00000623713 1621 ntBASIC19.13■□□□□ 0.65
NLRP3Q96P20 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.13■□□□□ 0.65
NLRP3Q96P20 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRP3Q96P20 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLRP3Q96P20 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NLRP3Q96P20 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NLRP3Q96P20 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NLRP3Q96P20 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.12■□□□□ 0.65
NLRP3Q96P20 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRP3Q96P20 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRP3Q96P20 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
NLRP3Q96P20 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NLRP3Q96P20 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRP3Q96P20 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.12■□□□□ 0.65
NLRP3Q96P20 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NLRP3Q96P20 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.12■□□□□ 0.65
NLRP3Q96P20 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.12■□□□□ 0.65
NLRP3Q96P20 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRP3Q96P20 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLRP3Q96P20 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms