Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX27Q96L92 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNX27Q96L92 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNX27Q96L92 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.81■□□□□ 0.28
SNX27Q96L92 AC084364.1-201ENST00000551967 1556 ntBASIC16.81■□□□□ 0.28
SNX27Q96L92 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.81■□□□□ 0.28
SNX27Q96L92 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SNX27Q96L92 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.81■□□□□ 0.28
SNX27Q96L92 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SNX27Q96L92 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX27Q96L92 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX27Q96L92 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.81■□□□□ 0.28
SNX27Q96L92 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.81■□□□□ 0.28
SNX27Q96L92 AC079328.1-201ENST00000560358 952 ntBASIC16.81■□□□□ 0.28
SNX27Q96L92 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.81■□□□□ 0.28
SNX27Q96L92 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SNX27Q96L92 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX27Q96L92 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.81■□□□□ 0.28
SNX27Q96L92 AC093813.1-201ENST00000605066 256 ntBASIC16.81■□□□□ 0.28
SNX27Q96L92 AL118558.3-201ENST00000607414 1079 ntBASIC16.81■□□□□ 0.28
SNX27Q96L92 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.81■□□□□ 0.28
SNX27Q96L92 AC148477.9-201ENST00000623974 539 ntBASIC16.81■□□□□ 0.28
SNX27Q96L92 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX27Q96L92 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.81■□□□□ 0.28
SNX27Q96L92 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.81■□□□□ 0.28
SNX27Q96L92 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SNX27Q96L92 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNX27Q96L92 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.81■□□□□ 0.28
SNX27Q96L92 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNX27Q96L92 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.8■□□□□ 0.28
SNX27Q96L92 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SNX27Q96L92 AC009090.5-201ENST00000624886 2285 ntBASIC16.8■□□□□ 0.28
SNX27Q96L92 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.8■□□□□ 0.28
SNX27Q96L92 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SNX27Q96L92 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.8■□□□□ 0.28
SNX27Q96L92 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNX27Q96L92 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.8■□□□□ 0.28
SNX27Q96L92 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.8■□□□□ 0.28
SNX27Q96L92 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SNX27Q96L92 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 TDH-203ENST00000531764 1110 ntBASIC16.8■□□□□ 0.28
SNX27Q96L92 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.8■□□□□ 0.28
SNX27Q96L92 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 MIR4722-201ENST00000578292 60 ntBASIC16.8■□□□□ 0.28
SNX27Q96L92 AL512343.1-201ENST00000605837 169 ntBASIC16.8■□□□□ 0.28
SNX27Q96L92 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.8■□□□□ 0.28
SNX27Q96L92 AC022188.1-201ENST00000620960 1664 ntBASIC16.8■□□□□ 0.28
SNX27Q96L92 PRAL-201ENST00000624952 3286 ntBASIC16.8■□□□□ 0.28
SNX27Q96L92 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.8■□□□□ 0.28
SNX27Q96L92 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SNX27Q96L92 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SNX27Q96L92 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SNX27Q96L92 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.8■□□□□ 0.28
SNX27Q96L92 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SNX27Q96L92 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNX27Q96L92 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.79■□□□□ 0.28
SNX27Q96L92 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SNX27Q96L92 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms