Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.58■□□□□ 0.08
ECHDC3Q96DC8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ECHDC3Q96DC8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
ECHDC3Q96DC8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ECHDC3Q96DC8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 CU634019.7-201ENST00000624153 1185 ntBASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 FP236241.2-201ENST00000624906 1185 ntBASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 AC063926.2-201ENST00000623766 1308 ntBASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ECHDC3Q96DC8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 AC104457.1-201ENST00000401024 814 ntBASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 AC132938.2-201ENST00000579188 680 ntBASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 AL591163.1-201ENST00000641757 987 ntBASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 AL138799.1-201ENST00000448213 1675 ntBASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
ECHDC3Q96DC8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 PAUPAR-201ENST00000630360 2965 ntBASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 CICP6-201ENST00000457191 2729 ntBASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 FER1L4-210ENST00000615531 5998 ntBASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 AC087481.3-201ENST00000602886 1894 ntBASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 TMBIM7P-203ENST00000641617 1718 ntBASIC15.55■□□□□ 0.08
ECHDC3Q96DC8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms