Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.29■□□□□ 0.04
NCLNQ969V3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NCLNQ969V3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.29■□□□□ 0.04
NCLNQ969V3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.29■□□□□ 0.04
NCLNQ969V3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NCLNQ969V3 TMBIM7P-203ENST00000641617 1718 ntBASIC15.29■□□□□ 0.04
NCLNQ969V3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.29■□□□□ 0.04
NCLNQ969V3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 AC008677.1-201ENST00000519230 1561 ntBASIC15.29■□□□□ 0.04
NCLNQ969V3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NCLNQ969V3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NCLNQ969V3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NCLNQ969V3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NCLNQ969V3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.29■□□□□ 0.04
NCLNQ969V3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.29■□□□□ 0.04
NCLNQ969V3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.29■□□□□ 0.04
NCLNQ969V3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.29■□□□□ 0.04
NCLNQ969V3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
NCLNQ969V3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.29■□□□□ 0.04
NCLNQ969V3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.29■□□□□ 0.04
NCLNQ969V3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.29■□□□□ 0.04
NCLNQ969V3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCLNQ969V3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
NCLNQ969V3 AC087481.3-201ENST00000602886 1894 ntBASIC15.29■□□□□ 0.04
NCLNQ969V3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.29■□□□□ 0.04
NCLNQ969V3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NCLNQ969V3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NCLNQ969V3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.28■□□□□ 0.04
NCLNQ969V3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.28■□□□□ 0.04
NCLNQ969V3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 AC093724.1-201ENST00000448659 1027 ntBASIC15.28■□□□□ 0.04
NCLNQ969V3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 AC025678.2-201ENST00000562061 970 ntBASIC15.28■□□□□ 0.04
NCLNQ969V3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.28■□□□□ 0.04
NCLNQ969V3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.28■□□□□ 0.04
NCLNQ969V3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NCLNQ969V3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.28■□□□□ 0.04
NCLNQ969V3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCLNQ969V3 FOXO1B-201ENST00000504678 1527 ntBASIC15.27■□□□□ 0.04
NCLNQ969V3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCLNQ969V3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCLNQ969V3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCLNQ969V3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NCLNQ969V3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCLNQ969V3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.27■□□□□ 0.04
NCLNQ969V3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCLNQ969V3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCLNQ969V3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.27■□□□□ 0.04
NCLNQ969V3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCLNQ969V3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NCLNQ969V3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NCLNQ969V3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.27■□□□□ 0.04
NCLNQ969V3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.27■□□□□ 0.04
NCLNQ969V3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.27■□□□□ 0.04
NCLNQ969V3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms