Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 KRT18P64-201ENST00000434946 1219 ntBASIC13.73□□□□□ -0.21
CPEB3Q8NE35 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 LINC01115-203ENST00000606068 577 ntBASIC13.73□□□□□ -0.21
CPEB3Q8NE35 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 SSR4P1-203ENST00000599569 2260 ntBASIC13.73□□□□□ -0.21
CPEB3Q8NE35 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 RPL13P2-201ENST00000440687 659 ntBASIC13.72□□□□□ -0.21
CPEB3Q8NE35 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 AC074044.1-201ENST00000609673 707 ntBASIC13.72□□□□□ -0.21
CPEB3Q8NE35 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.72□□□□□ -0.21
CPEB3Q8NE35 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms