Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 AC092474.2-201ENST00000424288 719 ntBASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 AL359258.3-201ENST00000622910 2331 ntBASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM42Q8IWZ5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 AL691432.1-201ENST00000596308 1422 ntBASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 FAM8A3P-201ENST00000427218 844 ntBASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM42Q8IWZ5 REXO1L1P-202ENST00000608646 1974 ntBASIC15.71■□□□□ 0.1
TRIM42Q8IWZ5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.71■□□□□ 0.1
TRIM42Q8IWZ5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRIM42Q8IWZ5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms