Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC83Q8IWF9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 CICP11-201ENST00000434745 2827 ntBASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 AL079307.3-201ENST00000556114 283 ntBASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC83Q8IWF9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 AC074338.1-201ENST00000416825 156 ntBASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 CICP23-201ENST00000605013 2741 ntBASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 AL035456.1-201ENST00000456064 1369 ntBASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC83Q8IWF9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms