Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.11■□□□□ 0.17
CDKL3Q8IVW4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL3Q8IVW4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CDKL3Q8IVW4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDKL3Q8IVW4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKL3Q8IVW4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL3Q8IVW4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL3Q8IVW4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.11■□□□□ 0.17
CDKL3Q8IVW4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 KRT18P13-201ENST00000400056 1290 ntBASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 AL033527.5-202ENST00000641632 1098 ntBASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.1■□□□□ 0.17
CDKL3Q8IVW4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 CNN2P2-201ENST00000443536 909 ntBASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 CNN2P3-201ENST00000450201 906 ntBASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 HLA-V-204ENST00000476601 1289 ntBASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 HLA-J-203ENST00000494367 1087 ntBASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 AL136317.3-201ENST00000618497 906 ntBASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.09■□□□□ 0.17
CDKL3Q8IVW4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms