Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 AL355306.1-201ENST00000415580 579 ntBASIC17.05■□□□□ 0.32
CNGA4Q8IV77 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 AL662844.1-201ENST00000546340 181 ntBASIC17.05■□□□□ 0.32
CNGA4Q8IV77 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNGA4Q8IV77 CICP14-201ENST00000629111 2732 ntBASIC17.05■□□□□ 0.32
CNGA4Q8IV77 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 AC104109.2-201ENST00000602919 1418 ntBASIC17.04■□□□□ 0.32
CNGA4Q8IV77 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 AL607033.1-201ENST00000623900 1599 ntBASIC17.04■□□□□ 0.32
CNGA4Q8IV77 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 AC140479.7-201ENST00000636301 2332 ntBASIC17.04■□□□□ 0.32
CNGA4Q8IV77 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.04■□□□□ 0.32
CNGA4Q8IV77 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 AC084364.1-201ENST00000551967 1556 ntBASIC17.03■□□□□ 0.32
CNGA4Q8IV77 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 TFAMP1-201ENST00000412727 736 ntBASIC17.03■□□□□ 0.32
CNGA4Q8IV77 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 RN7SL589P-201ENST00000481268 310 ntBASIC17.03■□□□□ 0.32
CNGA4Q8IV77 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNGA4Q8IV77 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms