Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ZNF546Q86UE3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 BNIP3P18-201ENST00000593976 575 ntBASIC13.09□□□□□ -0.31
ZNF546Q86UE3 AC099521.3-201ENST00000624251 2938 ntBASIC13.09□□□□□ -0.31
ZNF546Q86UE3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 AC097359.2-201ENST00000604992 2389 ntBASIC13.09□□□□□ -0.31
ZNF546Q86UE3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 KRT18P1-202ENST00000452408 1331 ntBASIC13.09□□□□□ -0.31
ZNF546Q86UE3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZNF546Q86UE3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ZNF546Q86UE3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.08□□□□□ -0.31
ZNF546Q86UE3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ZNF546Q86UE3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
ZNF546Q86UE3 NSUN5P1-202ENST00000421140 1535 ntBASIC13.08□□□□□ -0.31
ZNF546Q86UE3 NSUN5P2-203ENST00000457352 1529 ntBASIC13.08□□□□□ -0.31
ZNF546Q86UE3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.31
ZNF546Q86UE3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ZNF546Q86UE3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ZNF546Q86UE3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 AC089987.1-201ENST00000551654 2209 ntBASIC13.08□□□□□ -0.32
ZNF546Q86UE3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 RCN1P2-201ENST00000398357 915 ntBASIC13.08□□□□□ -0.32
ZNF546Q86UE3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF546Q86UE3 AC245100.5-201ENST00000452108 331 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms