Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 AC009084.3-201ENST00000623356 437 ntBASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 KRT8P14-201ENST00000414254 1442 ntBASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 CAP2P1-201ENST00000557743 1390 ntBASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 AL645937.2-201ENST00000396808 931 ntBASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 IGHV3-37-201ENST00000518544 340 ntBASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 AC027139.1-201ENST00000565286 951 ntBASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 SYT17-208ENST00000568433 812 ntTSL 3 BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13BQ7Z7G8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 AC007274.2-201ENST00000421675 662 ntBASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 RTN3P1-201ENST00000536295 711 ntBASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 AC011840.2-201ENST00000563063 1520 ntBASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 AC092850.2-201ENST00000623821 2697 ntBASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 IDS-203ENST00000428056 1213 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 MST1L-201ENST00000442552 2185 ntBASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 INE2-201ENST00000630399 1874 ntBASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 AC084364.1-201ENST00000551967 1556 ntBASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 AC006335.1-201ENST00000445200 547 ntBASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 AC103988.2-201ENST00000561804 725 ntBASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 COX6A1P2-201ENST00000620597 330 ntBASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms