Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 AC126365.1-201ENST00000578585 1514 ntBASIC14.23□□□□□ -0.13
SHFQ7M4L6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 FGD5P1-202ENST00000614866 2498 ntBASIC14.23□□□□□ -0.13
SHFQ7M4L6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SHFQ7M4L6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHFQ7M4L6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 ST20-AS1-201ENST00000560255 4223 ntBASIC14.22□□□□□ -0.13
SHFQ7M4L6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 AC009078.2-202ENST00000463353 338 ntBASIC14.22□□□□□ -0.13
SHFQ7M4L6 RPL13AP23-201ENST00000480739 586 ntBASIC14.22□□□□□ -0.13
SHFQ7M4L6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 AC105233.2-201ENST00000523697 349 ntBASIC14.22□□□□□ -0.13
SHFQ7M4L6 AF228730.5-201ENST00000530288 346 ntBASIC14.22□□□□□ -0.13
SHFQ7M4L6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 RARRES2P8-201ENST00000566335 367 ntBASIC14.22□□□□□ -0.13
SHFQ7M4L6 AP002472.1-201ENST00000577490 586 ntBASIC14.22□□□□□ -0.13
SHFQ7M4L6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 SPTSSB-204ENST00000617024 1292 ntBASIC14.22□□□□□ -0.13
SHFQ7M4L6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHFQ7M4L6 ZNF259P1-201ENST00000407656 1365 ntBASIC14.22□□□□□ -0.13
SHFQ7M4L6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.22□□□□□ -0.13
SHFQ7M4L6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.21□□□□□ -0.13
SHFQ7M4L6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AJ011931.1-201ENST00000618749 2492 ntBASIC14.21□□□□□ -0.13
SHFQ7M4L6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SHFQ7M4L6 AKAP8P1-201ENST00000434743 1349 ntBASIC14.21□□□□□ -0.13
SHFQ7M4L6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms