Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 BX640515.1-201ENST00000617215 977 ntBASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SMARCD3Q6STE5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 CYP4F24P-201ENST00000586049 1580 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 MIR346-201ENST00000362234 95 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 AL645939.2-201ENST00000427340 991 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SPDYE11-202ENST00000450699 704 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SLC25A1P1-201ENST00000528351 927 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 AP000842.3-202ENST00000569238 1080 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SPDYE9P-201ENST00000570642 692 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 AC026979.3-201ENST00000607315 403 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SPDYE10P-202ENST00000612005 668 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SPDYE8P-202ENST00000612377 668 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 AC092902.6-201ENST00000641783 218 ntBASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SMARCD3Q6STE5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMARCD3Q6STE5 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms