Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 IGHV3-47-201ENST00000425060 335 ntBASIC14.82□□□□□ -0.04
LPCAT4Q643R3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 RN7SL850P-201ENST00000579959 291 ntBASIC14.82□□□□□ -0.04
LPCAT4Q643R3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 AL359881.3-201ENST00000602640 1721 ntBASIC14.82□□□□□ -0.04
LPCAT4Q643R3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 TCAF1P1-201ENST00000414990 2232 ntBASIC14.82□□□□□ -0.04
LPCAT4Q643R3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 AP005117.1-201ENST00000584346 1413 ntBASIC14.82□□□□□ -0.04
LPCAT4Q643R3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LPCAT4Q643R3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 DUX4L26-201ENST00000489078 1255 ntBASIC14.81□□□□□ -0.04
LPCAT4Q643R3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 NKAPP1-205ENST00000585790 367 ntBASIC14.81□□□□□ -0.04
LPCAT4Q643R3 MIR4321-201ENST00000592276 80 ntBASIC14.81□□□□□ -0.04
LPCAT4Q643R3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 AC021097.1-201ENST00000607902 574 ntBASIC14.81□□□□□ -0.04
LPCAT4Q643R3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 AC129492.6-201ENST00000611383 1305 ntBASIC14.81□□□□□ -0.04
LPCAT4Q643R3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LPCAT4Q643R3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 MST1P2-201ENST00000457982 2291 ntBASIC14.8□□□□□ -0.04
LPCAT4Q643R3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 PPT1-213ENST00000641319 2388 ntBASIC14.8□□□□□ -0.04
LPCAT4Q643R3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 GPX1P2-201ENST00000429271 606 ntBASIC14.8□□□□□ -0.04
LPCAT4Q643R3 DRAXINP1-201ENST00000437611 948 ntBASIC14.8□□□□□ -0.04
LPCAT4Q643R3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.8□□□□□ -0.04
LPCAT4Q643R3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 AC091076.1-201ENST00000610741 619 ntBASIC14.8□□□□□ -0.04
LPCAT4Q643R3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LPCAT4Q643R3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms