Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RC3H1Q5TC82 AC055811.4-201ENST00000624039 1754 ntBASIC19.37■□□□□ 0.69
RC3H1Q5TC82 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.36■□□□□ 0.69
RC3H1Q5TC82 AC006335.1-201ENST00000445200 547 ntBASIC19.36■□□□□ 0.69
RC3H1Q5TC82 PUDPP3-201ENST00000445368 636 ntBASIC19.36■□□□□ 0.69
RC3H1Q5TC82 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RC3H1Q5TC82 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 AC006480.2-201ENST00000609770 1337 ntBASIC19.35■□□□□ 0.69
RC3H1Q5TC82 AC012313.1-201ENST00000593393 3059 ntBASIC19.35■□□□□ 0.69
RC3H1Q5TC82 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 AC234782.1-201ENST00000451950 919 ntBASIC19.35■□□□□ 0.69
RC3H1Q5TC82 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 AC009955.4-201ENST00000597192 544 ntBASIC19.35■□□□□ 0.69
RC3H1Q5TC82 AL358472.3-201ENST00000608147 415 ntBASIC19.35■□□□□ 0.69
RC3H1Q5TC82 AL353770.1-201ENST00000614915 403 ntBASIC19.35■□□□□ 0.69
RC3H1Q5TC82 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RC3H1Q5TC82 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 AC026471.1-201ENST00000564629 3026 ntBASIC19.34■□□□□ 0.69
RC3H1Q5TC82 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 AC008267.1-201ENST00000474858 1069 ntBASIC19.34■□□□□ 0.69
RC3H1Q5TC82 AC125604.1-201ENST00000496255 707 ntBASIC19.34■□□□□ 0.69
RC3H1Q5TC82 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 AP000346.4-201ENST00000614827 381 ntBASIC19.34■□□□□ 0.69
RC3H1Q5TC82 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.34■□□□□ 0.69
RC3H1Q5TC82 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RC3H1Q5TC82 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms