Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 AL136982.4-201ENST00000437689 1740 ntBASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 CICP4-201ENST00000447359 2812 ntBASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 KRT8P37-201ENST00000451609 1420 ntBASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC00242Q5T6M2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 AC105233.2-201ENST00000523697 349 ntBASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 AF228730.5-201ENST00000530288 346 ntBASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 AC025580.3-201ENST00000617932 1424 ntBASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LINC00242Q5T6M2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LINC00242Q5T6M2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms