Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 AC002347.1-201ENST00000569543 541 ntBASIC14.34□□□□□ -0.11
RBM48Q5RL73 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 TCAF1P1-201ENST00000414990 2232 ntBASIC14.34□□□□□ -0.11
RBM48Q5RL73 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.34□□□□□ -0.11
RBM48Q5RL73 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBM48Q5RL73 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 AC011474.4-201ENST00000623523 2076 ntBASIC14.34□□□□□ -0.11
RBM48Q5RL73 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RBM48Q5RL73 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RBM48Q5RL73 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RBM48Q5RL73 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RBM48Q5RL73 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RBM48Q5RL73 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RBM48Q5RL73 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
RBM48Q5RL73 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RBM48Q5RL73 AC107918.4-201ENST00000641966 3141 ntBASIC14.33□□□□□ -0.11
RBM48Q5RL73 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RBM48Q5RL73 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 ELK2BP-201ENST00000415014 1224 ntBASIC14.33□□□□□ -0.12
RBM48Q5RL73 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.33□□□□□ -0.12
RBM48Q5RL73 AC011467.4-201ENST00000594891 528 ntBASIC14.33□□□□□ -0.12
RBM48Q5RL73 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RBM48Q5RL73 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RBM48Q5RL73 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RBM48Q5RL73 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
RBM48Q5RL73 AC015802.1-201ENST00000588104 1449 ntBASIC14.32□□□□□ -0.12
RBM48Q5RL73 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
RBM48Q5RL73 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.32□□□□□ -0.12
RBM48Q5RL73 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RBM48Q5RL73 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RBM48Q5RL73 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RBM48Q5RL73 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RBM48Q5RL73 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RBM48Q5RL73 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.32□□□□□ -0.12
RBM48Q5RL73 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 BNIP3P1-202ENST00000550043 1585 ntBASIC14.32□□□□□ -0.12
RBM48Q5RL73 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RBM48Q5RL73 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms