Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC006504.5-208ENST00000588784 2401 ntBASIC14.09□□□□□ -0.15
CCDC58Q4VC31 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 AC018712.1-201ENST00000455767 687 ntBASIC14.09□□□□□ -0.15
CCDC58Q4VC31 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 MIR4751-201ENST00000578027 74 ntBASIC14.09□□□□□ -0.15
CCDC58Q4VC31 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC58Q4VC31 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.08□□□□□ -0.15
CCDC58Q4VC31 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC58Q4VC31 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC58Q4VC31 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC58Q4VC31 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC58Q4VC31 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.08□□□□□ -0.15
CCDC58Q4VC31 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CCDC58Q4VC31 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 KRT18P35-201ENST00000510488 1269 ntBASIC14.08□□□□□ -0.16
CCDC58Q4VC31 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 AC012640.2-201ENST00000561606 901 ntBASIC14.08□□□□□ -0.16
CCDC58Q4VC31 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 AGAP7P-201ENST00000582299 2062 ntBASIC14.08□□□□□ -0.16
CCDC58Q4VC31 AGAP14-201ENST00000624701 2060 ntBASIC14.08□□□□□ -0.16
CCDC58Q4VC31 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC58Q4VC31 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms