Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 INGX-202ENST00000489074 768 ntBASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 MEIS3P1-201ENST00000495167 958 ntBASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 RNA5SP421-201ENST00000516864 134 ntBASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 AC023024.2-201ENST00000623561 1993 ntBASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 CICP11-201ENST00000434745 2827 ntBASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 AC000095.1-201ENST00000603208 874 ntBASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN20Q4JDL3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 AC148477.4-201ENST00000613430 1793 ntBASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 CLK3P2-201ENST00000427566 1453 ntBASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 RPL5P21-201ENST00000404620 815 ntBASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 AC023310.3-201ENST00000557027 670 ntBASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 AC100756.1-201ENST00000562736 682 ntBASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 AC138749.3-201ENST00000567691 622 ntBASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 AC116165.1-201ENST00000611806 668 ntBASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PTPN20Q4JDL3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms