Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 AP001889.1-201ENST00000525414 633 ntBASIC18.75■□□□□ 0.59
RFX7Q2KHR2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 SLC25A47P1-201ENST00000531577 414 ntBASIC18.75■□□□□ 0.59
RFX7Q2KHR2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFX7Q2KHR2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 AC005229.1-201ENST00000392885 409 ntBASIC18.74■□□□□ 0.59
RFX7Q2KHR2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 AC104989.1-201ENST00000519711 778 ntBASIC18.74■□□□□ 0.59
RFX7Q2KHR2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 AC133552.6-201ENST00000613406 534 ntBASIC18.74■□□□□ 0.59
RFX7Q2KHR2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 MSTO2P-201ENST00000314835 1709 ntBASIC18.74■□□□□ 0.59
RFX7Q2KHR2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 AC148477.4-201ENST00000613430 1793 ntBASIC18.74■□□□□ 0.59
RFX7Q2KHR2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 MROH4P-201ENST00000431302 1578 ntBASIC18.74■□□□□ 0.59
RFX7Q2KHR2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.74■□□□□ 0.59
RFX7Q2KHR2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 AC138035.3-201ENST00000622706 2791 ntBASIC18.73■□□□□ 0.59
RFX7Q2KHR2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 C1QBPP1-201ENST00000400117 770 ntBASIC18.73■□□□□ 0.59
RFX7Q2KHR2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 AC134915.1-201ENST00000426461 574 ntBASIC18.73■□□□□ 0.59
RFX7Q2KHR2 KRT43P-201ENST00000434019 910 ntBASIC18.73■□□□□ 0.59
RFX7Q2KHR2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 RPL13AP25-201ENST00000484130 612 ntBASIC18.73■□□□□ 0.59
RFX7Q2KHR2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 TDH-203ENST00000531764 1110 ntBASIC18.73■□□□□ 0.59
RFX7Q2KHR2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFX7Q2KHR2 GNRHR2-203ENST00000581100 1187 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms