Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.2■□□□□ 0.34
NFX1Q12986 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.2■□□□□ 0.34
NFX1Q12986 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.2■□□□□ 0.34
NFX1Q12986 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.2■□□□□ 0.34
NFX1Q12986 AL033527.4-201ENST00000641026 673 ntBASIC17.2■□□□□ 0.34
NFX1Q12986 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.2■□□□□ 0.34
NFX1Q12986 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.19■□□□□ 0.34
NFX1Q12986 AC010491.1-201ENST00000563101 2797 ntBASIC17.19■□□□□ 0.34
NFX1Q12986 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NFX1Q12986 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.19■□□□□ 0.34
NFX1Q12986 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.19■□□□□ 0.34
NFX1Q12986 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NFX1Q12986 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NFX1Q12986 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NFX1Q12986 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.19■□□□□ 0.34
NFX1Q12986 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.19■□□□□ 0.34
NFX1Q12986 KLF2P4-201ENST00000451959 1225 ntBASIC17.19■□□□□ 0.34
NFX1Q12986 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.19■□□□□ 0.34
NFX1Q12986 AC068587.3-201ENST00000526613 355 ntBASIC17.19■□□□□ 0.34
NFX1Q12986 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.19■□□□□ 0.34
NFX1Q12986 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.19■□□□□ 0.34
NFX1Q12986 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.19■□□□□ 0.34
NFX1Q12986 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.19■□□□□ 0.34
NFX1Q12986 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.19■□□□□ 0.34
NFX1Q12986 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NFX1Q12986 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.19■□□□□ 0.34
NFX1Q12986 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NFX1Q12986 AL121723.1-201ENST00000445194 1519 ntBASIC17.19■□□□□ 0.34
NFX1Q12986 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.19■□□□□ 0.34
NFX1Q12986 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.19■□□□□ 0.34
NFX1Q12986 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.19■□□□□ 0.34
NFX1Q12986 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.19■□□□□ 0.34
NFX1Q12986 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFX1Q12986 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.18■□□□□ 0.34
NFX1Q12986 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.18■□□□□ 0.34
NFX1Q12986 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFX1Q12986 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFX1Q12986 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
NFX1Q12986 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFX1Q12986 REXO1L6P-201ENST00000603433 1515 ntBASIC17.18■□□□□ 0.34
NFX1Q12986 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFX1Q12986 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFX1Q12986 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFX1Q12986 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFX1Q12986 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.18■□□□□ 0.34
NFX1Q12986 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFX1Q12986 MIR648-201ENST00000385046 94 ntBASIC17.18■□□□□ 0.34
NFX1Q12986 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.18■□□□□ 0.34
NFX1Q12986 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NFX1Q12986 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.18■□□□□ 0.34
NFX1Q12986 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.18■□□□□ 0.34
NFX1Q12986 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFX1Q12986 AC092658.1-201ENST00000505836 891 ntBASIC17.18■□□□□ 0.34
NFX1Q12986 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.18■□□□□ 0.34
NFX1Q12986 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NFX1Q12986 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.18■□□□□ 0.34
NFX1Q12986 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.18■□□□□ 0.34
NFX1Q12986 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFX1Q12986 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.18■□□□□ 0.34
NFX1Q12986 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms