Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
PCDH1Q08174 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDH1Q08174 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH1Q08174 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH1Q08174 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH1Q08174 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PCDH1Q08174 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH1Q08174 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PCDH1Q08174 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH1Q08174 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PCDH1Q08174 AC092580.3-201ENST00000430932 139 ntBASIC15.12■□□□□ 0.01
PCDH1Q08174 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.12■□□□□ 0.01
PCDH1Q08174 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
PCDH1Q08174 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH1Q08174 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH1Q08174 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH1Q08174 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.12■□□□□ 0.01
PCDH1Q08174 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH1Q08174 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH1Q08174 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH1Q08174 AC004449.1-201ENST00000564240 433 ntBASIC15.12■□□□□ 0.01
PCDH1Q08174 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.12■□□□□ 0.01
PCDH1Q08174 AC015910.1-201ENST00000579400 975 ntBASIC15.12■□□□□ 0.01
PCDH1Q08174 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
PCDH1Q08174 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH1Q08174 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH1Q08174 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PCDH1Q08174 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH1Q08174 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH1Q08174 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH1Q08174 AC138035.3-201ENST00000622706 2791 ntBASIC15.12■□□□□ 0.01
PCDH1Q08174 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH1Q08174 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH1Q08174 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDH1Q08174 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH1Q08174 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH1Q08174 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDH1Q08174 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDH1Q08174 FAM45BP-202ENST00000592932 1624 ntBASIC15.11■□□□□ 0.01
PCDH1Q08174 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
PCDH1Q08174 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 AC015922.1-201ENST00000421102 1152 ntBASIC15.11■□□□□ 0.01
PCDH1Q08174 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDH1Q08174 RN7SL618P-201ENST00000477850 296 ntBASIC15.11■□□□□ 0.01
PCDH1Q08174 AC125807.1-201ENST00000483097 614 ntBASIC15.11■□□□□ 0.01
PCDH1Q08174 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDH1Q08174 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDH1Q08174 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.11■□□□□ 0.01
PCDH1Q08174 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDH1Q08174 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 AL844908.2-201ENST00000609461 460 ntBASIC15.11■□□□□ 0.01
PCDH1Q08174 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH1Q08174 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH1Q08174 AP003680.1-201ENST00000598970 3660 ntBASIC15.11■□□□□ 0.01
PCDH1Q08174 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH1Q08174 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms