Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 REXO1L2P-201ENST00000425429 2069 ntBASIC14.05□□□□□ -0.16
SCN1BQ07699 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 AC126365.1-201ENST00000578585 1514 ntBASIC14.05□□□□□ -0.16
SCN1BQ07699 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.05□□□□□ -0.16
SCN1BQ07699 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SCN1BQ07699 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN1BQ07699 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 AC092127.1-201ENST00000567093 3455 ntBASIC14.04□□□□□ -0.16
SCN1BQ07699 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.04□□□□□ -0.16
SCN1BQ07699 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.04□□□□□ -0.16
SCN1BQ07699 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 IGHV3-65-201ENST00000523210 341 ntBASIC14.04□□□□□ -0.16
SCN1BQ07699 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.04□□□□□ -0.16
SCN1BQ07699 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.04□□□□□ -0.16
SCN1BQ07699 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.04□□□□□ -0.16
SCN1BQ07699 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.04□□□□□ -0.16
SCN1BQ07699 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.04□□□□□ -0.16
SCN1BQ07699 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.04□□□□□ -0.16
SCN1BQ07699 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SCN1BQ07699 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN1BQ07699 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SCN1BQ07699 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN1BQ07699 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.03□□□□□ -0.16
SCN1BQ07699 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 LINC01230-201ENST00000625222 3017 ntBASIC14.03□□□□□ -0.16
SCN1BQ07699 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SCN1BQ07699 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SCN1BQ07699 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SCN1BQ07699 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.03□□□□□ -0.16
SCN1BQ07699 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SCN1BQ07699 AC018712.1-201ENST00000455767 687 ntBASIC14.03□□□□□ -0.16
SCN1BQ07699 AC108073.2-201ENST00000464002 357 ntBASIC14.03□□□□□ -0.16
SCN1BQ07699 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.03□□□□□ -0.16
SCN1BQ07699 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.03□□□□□ -0.16
SCN1BQ07699 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SCN1BQ07699 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.03□□□□□ -0.16
SCN1BQ07699 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.03□□□□□ -0.16
SCN1BQ07699 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.03□□□□□ -0.16
SCN1BQ07699 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.03□□□□□ -0.16
SCN1BQ07699 MIR4751-201ENST00000578027 74 ntBASIC14.03□□□□□ -0.16
SCN1BQ07699 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.03□□□□□ -0.16
SCN1BQ07699 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.03□□□□□ -0.16
SCN1BQ07699 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN1BQ07699 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.03□□□□□ -0.16
SCN1BQ07699 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms