Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB11AP62491 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB11AP62491 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB11AP62491 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB11AP62491 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB11AP62491 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB11AP62491 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB11AP62491 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB11AP62491 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB11AP62491 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RAB11AP62491 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB11AP62491 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAB11AP62491 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB11AP62491 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB11AP62491 AC090616.6-203ENST00000579186 1945 ntBASIC12.82□□□□□ -0.36
RAB11AP62491 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RAB11AP62491 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RAB11AP62491 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB11AP62491 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB11AP62491 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAB11AP62491 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB11AP62491 PRSS29P-201ENST00000440800 595 ntBASIC12.81□□□□□ -0.36
RAB11AP62491 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 AF238378.1-201ENST00000526806 358 ntBASIC12.81□□□□□ -0.36
RAB11AP62491 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.81□□□□□ -0.36
RAB11AP62491 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.81□□□□□ -0.36
RAB11AP62491 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.81□□□□□ -0.36
RAB11AP62491 MIR4751-201ENST00000578027 74 ntBASIC12.81□□□□□ -0.36
RAB11AP62491 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 PMS2P7-201ENST00000506558 1336 ntBASIC12.81□□□□□ -0.36
RAB11AP62491 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAB11AP62491 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB11AP62491 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB11AP62491 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RAB11AP62491 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RAB11AP62491 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RAB11AP62491 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB11AP62491 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB11AP62491 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB11AP62491 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB11AP62491 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
RAB11AP62491 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 WASH6P-202ENST00000359512 1437 ntBASIC12.8□□□□□ -0.36
RAB11AP62491 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB11AP62491 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB11AP62491 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
RAB11AP62491 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RAB11AP62491 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RAB11AP62491 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
RAB11AP62491 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RAB11AP62491 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RAB11AP62491 AL137784.3-201ENST00000623858 2288 ntBASIC12.8□□□□□ -0.36
RAB11AP62491 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB11AP62491 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RAB11AP62491 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms