Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
AP1S1P61966 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 INTS4P2-202ENST00000614726 2019 ntBASIC15.7■□□□□ 0.1
AP1S1P61966 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.7■□□□□ 0.1
AP1S1P61966 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.7■□□□□ 0.1
AP1S1P61966 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP1S1P61966 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 AC134915.1-201ENST00000426461 574 ntBASIC15.7■□□□□ 0.1
AP1S1P61966 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 COX20P2-201ENST00000452636 358 ntBASIC15.7■□□□□ 0.1
AP1S1P61966 VDAC1P7-201ENST00000462417 847 ntBASIC15.7■□□□□ 0.1
AP1S1P61966 AC026410.3-201ENST00000514280 936 ntBASIC15.7■□□□□ 0.1
AP1S1P61966 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
AP1S1P61966 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.7■□□□□ 0.1
AP1S1P61966 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
AP1S1P61966 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.7■□□□□ 0.1
AP1S1P61966 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.7■□□□□ 0.1
AP1S1P61966 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.7■□□□□ 0.1
AP1S1P61966 AL645728.2-202ENST00000641679 227 ntBASIC15.7■□□□□ 0.1
AP1S1P61966 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
AP1S1P61966 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AP1S1P61966 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
AP1S1P61966 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S1P61966 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.7■□□□□ 0.1
AP1S1P61966 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AP1S1P61966 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S1P61966 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S1P61966 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
AP1S1P61966 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.69■□□□□ 0.1
AP1S1P61966 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 AC098614.1-201ENST00000368528 745 ntBASIC15.69■□□□□ 0.1
AP1S1P61966 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 DGCR5-201ENST00000399539 862 ntBASIC15.69■□□□□ 0.1
AP1S1P61966 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S1P61966 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S1P61966 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.69■□□□□ 0.1
AP1S1P61966 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.69■□□□□ 0.1
AP1S1P61966 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.69■□□□□ 0.1
AP1S1P61966 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.69■□□□□ 0.1
AP1S1P61966 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S1P61966 AC120045.2-201ENST00000567334 178 ntBASIC15.69■□□□□ 0.1
AP1S1P61966 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.69■□□□□ 0.1
AP1S1P61966 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.69■□□□□ 0.1
AP1S1P61966 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S1P61966 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
AP1S1P61966 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
AP1S1P61966 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.69■□□□□ 0.1
AP1S1P61966 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.69■□□□□ 0.1
AP1S1P61966 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S1P61966 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S1P61966 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S1P61966 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms