Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.5□□□□□ -0.25
AP3S2P59780 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.5□□□□□ -0.25
AP3S2P59780 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AP3S2P59780 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
AP3S2P59780 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.5□□□□□ -0.25
AP3S2P59780 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 RNU1-129P-201ENST00000384064 167 ntBASIC13.5□□□□□ -0.25
AP3S2P59780 AC087499.1-201ENST00000418141 1075 ntBASIC13.5□□□□□ -0.25
AP3S2P59780 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.5□□□□□ -0.25
AP3S2P59780 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
AP3S2P59780 U1.21-201ENST00000580816 167 ntBASIC13.5□□□□□ -0.25
AP3S2P59780 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.5□□□□□ -0.25
AP3S2P59780 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
AP3S2P59780 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
AP3S2P59780 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AP3S2P59780 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
AP3S2P59780 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.5□□□□□ -0.25
AP3S2P59780 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.5□□□□□ -0.25
AP3S2P59780 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S2P59780 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
AP3S2P59780 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 AC073508.3-201ENST00000619697 1419 ntBASIC13.49□□□□□ -0.25
AP3S2P59780 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
AP3S2P59780 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.49□□□□□ -0.25
AP3S2P59780 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
AP3S2P59780 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.49□□□□□ -0.25
AP3S2P59780 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 TOB2P1-201ENST00000469761 992 ntBASIC13.49□□□□□ -0.25
AP3S2P59780 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.49□□□□□ -0.25
AP3S2P59780 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.49□□□□□ -0.25
AP3S2P59780 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 AC243562.2-201ENST00000561247 970 ntBASIC13.49□□□□□ -0.25
AP3S2P59780 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.49□□□□□ -0.25
AP3S2P59780 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 MIR5100-201ENST00000579544 119 ntBASIC13.49□□□□□ -0.25
AP3S2P59780 AC092329.2-201ENST00000598402 547 ntBASIC13.49□□□□□ -0.25
AP3S2P59780 AL031055.1-201ENST00000606362 631 ntBASIC13.49□□□□□ -0.25
AP3S2P59780 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S2P59780 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S2P59780 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S2P59780 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.49□□□□□ -0.25
AP3S2P59780 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
AP3S2P59780 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms