Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN6P56747 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 AC091046.1-201ENST00000331871 207 ntBASIC14.99□□□□□ -0.01
CLDN6P56747 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CLDN6P56747 AC136604.1-201ENST00000418535 575 ntBASIC14.99□□□□□ -0.01
CLDN6P56747 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN6P56747 EIF4HP1-201ENST00000453115 687 ntBASIC14.99□□□□□ -0.01
CLDN6P56747 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.99□□□□□ -0.01
CLDN6P56747 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CLDN6P56747 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.99□□□□□ -0.01
CLDN6P56747 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.99□□□□□ -0.01
CLDN6P56747 AC104982.3-201ENST00000581995 514 ntBASIC14.99□□□□□ -0.01
CLDN6P56747 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN6P56747 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CLDN6P56747 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CLDN6P56747 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CLDN6P56747 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN6P56747 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CLDN6P56747 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN6P56747 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CLDN6P56747 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN6P56747 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN6P56747 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN6P56747 AC008894.3-201ENST00000624324 3103 ntBASIC14.99□□□□□ -0.01
CLDN6P56747 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN6P56747 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLDN6P56747 AC018735.1-201ENST00000437208 1502 ntBASIC14.98□□□□□ -0.01
CLDN6P56747 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN6P56747 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLDN6P56747 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 AC006001.1-201ENST00000325130 474 ntBASIC14.98□□□□□ -0.01
CLDN6P56747 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN6P56747 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN6P56747 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN6P56747 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN6P56747 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 AKR7A2P1-201ENST00000460134 915 ntBASIC14.98□□□□□ -0.01
CLDN6P56747 KRT18P43-201ENST00000469825 1281 ntBASIC14.98□□□□□ -0.01
CLDN6P56747 RPSAP36-202ENST00000494591 1261 ntBASIC14.98□□□□□ -0.01
CLDN6P56747 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN6P56747 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLDN6P56747 AC105129.2-201ENST00000559536 390 ntBASIC14.98□□□□□ -0.01
CLDN6P56747 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN6P56747 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN6P56747 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.98□□□□□ -0.01
CLDN6P56747 AC000095.1-201ENST00000603208 874 ntBASIC14.98□□□□□ -0.01
CLDN6P56747 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN6P56747 AL096828.3-201ENST00000615354 462 ntBASIC14.98□□□□□ -0.01
CLDN6P56747 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN6P56747 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLDN6P56747 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN6P56747 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN6P56747 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLDN6P56747 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN6P56747 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN6P56747 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CLDN6P56747 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN6P56747 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN6P56747 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CLDN6P56747 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CLDN6P56747 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLDN6P56747 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLDN6P56747 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN6P56747 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CLDN6P56747 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN6P56747 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms