Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXG1P55316 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXG1P55316 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXG1P55316 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
FOXG1P55316 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
FOXG1P55316 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
FOXG1P55316 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXG1P55316 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.68□□□□□ -0.22
FOXG1P55316 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 NME2P1-201ENST00000426182 414 ntBASIC13.68□□□□□ -0.22
FOXG1P55316 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
FOXG1P55316 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.68□□□□□ -0.22
FOXG1P55316 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.68□□□□□ -0.22
FOXG1P55316 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 AC025181.2-201ENST00000606994 802 ntBASIC13.68□□□□□ -0.22
FOXG1P55316 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXG1P55316 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.68□□□□□ -0.22
FOXG1P55316 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.68□□□□□ -0.22
FOXG1P55316 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FOXG1P55316 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.68□□□□□ -0.22
FOXG1P55316 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.68□□□□□ -0.22
FOXG1P55316 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXG1P55316 SSR4P1-203ENST00000599569 2260 ntBASIC13.67□□□□□ -0.22
FOXG1P55316 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
FOXG1P55316 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXG1P55316 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
FOXG1P55316 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 DRD5P1-201ENST00000456605 1438 ntBASIC13.67□□□□□ -0.22
FOXG1P55316 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
FOXG1P55316 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.67□□□□□ -0.22
FOXG1P55316 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXG1P55316 AP006294.1-201ENST00000415407 339 ntBASIC13.67□□□□□ -0.22
FOXG1P55316 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXG1P55316 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXG1P55316 INE1-201ENST00000456273 945 ntBASIC13.67□□□□□ -0.22
FOXG1P55316 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXG1P55316 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXG1P55316 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FOXG1P55316 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXG1P55316 AC132938.2-201ENST00000579188 680 ntBASIC13.67□□□□□ -0.22
FOXG1P55316 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.67□□□□□ -0.22
FOXG1P55316 IGHV3-72-202ENST00000621503 303 ntBASIC13.67□□□□□ -0.22
FOXG1P55316 AL591163.1-201ENST00000641757 987 ntBASIC13.67□□□□□ -0.22
FOXG1P55316 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms