Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH4P55283 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH4P55283 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH4P55283 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.94■□□□□ 0.14
CDH4P55283 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH4P55283 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH4P55283 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CDH4P55283 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH4P55283 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CDH4P55283 ENPP7P5-201ENST00000541031 1031 ntBASIC15.94■□□□□ 0.14
CDH4P55283 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CDH4P55283 AC093813.1-201ENST00000605066 256 ntBASIC15.94■□□□□ 0.14
CDH4P55283 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CDH4P55283 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH4P55283 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH4P55283 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH4P55283 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH4P55283 KRT8P22-201ENST00000562317 1415 ntBASIC15.94■□□□□ 0.14
CDH4P55283 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH4P55283 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.93■□□□□ 0.14
CDH4P55283 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
CDH4P55283 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDH4P55283 AC005034.1-201ENST00000426657 489 ntBASIC15.93■□□□□ 0.14
CDH4P55283 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
CDH4P55283 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.93■□□□□ 0.14
CDH4P55283 INE1-201ENST00000456273 945 ntBASIC15.93■□□□□ 0.14
CDH4P55283 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH4P55283 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CDH4P55283 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.93■□□□□ 0.14
CDH4P55283 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.93■□□□□ 0.14
CDH4P55283 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH4P55283 AC107373.2-201ENST00000607735 490 ntBASIC15.93■□□□□ 0.14
CDH4P55283 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDH4P55283 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH4P55283 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH4P55283 AC063926.2-201ENST00000623766 1308 ntBASIC15.93■□□□□ 0.14
CDH4P55283 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CDH4P55283 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
CDH4P55283 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CDH4P55283 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
CDH4P55283 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH4P55283 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms