Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CASP9P55211 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CASP9P55211 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CASP9P55211 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.87□□□□□ -0.03
CASP9P55211 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
CASP9P55211 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.87□□□□□ -0.03
CASP9P55211 PHKG1P2-201ENST00000457537 863 ntBASIC14.87□□□□□ -0.03
CASP9P55211 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CASP9P55211 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.87□□□□□ -0.03
CASP9P55211 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP9P55211 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.87□□□□□ -0.03
CASP9P55211 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.87□□□□□ -0.03
CASP9P55211 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.87□□□□□ -0.03
CASP9P55211 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.87□□□□□ -0.03
CASP9P55211 AC010327.4-202ENST00000591484 748 ntBASIC14.87□□□□□ -0.03
CASP9P55211 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.87□□□□□ -0.03
CASP9P55211 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.87□□□□□ -0.03
CASP9P55211 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CASP9P55211 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP9P55211 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.87□□□□□ -0.03
CASP9P55211 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CASP9P55211 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP9P55211 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.87□□□□□ -0.03
CASP9P55211 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CASP9P55211 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 CICP24-201ENST00000605464 2705 ntBASIC14.86□□□□□ -0.03
CASP9P55211 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.86□□□□□ -0.03
CASP9P55211 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CASP9P55211 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.86□□□□□ -0.03
CASP9P55211 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.86□□□□□ -0.03
CASP9P55211 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CASP9P55211 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.86□□□□□ -0.03
CASP9P55211 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CASP9P55211 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 AZGP1P1-201ENST00000411909 902 ntBASIC14.86□□□□□ -0.03
CASP9P55211 AC004461.1-201ENST00000412461 403 ntBASIC14.86□□□□□ -0.03
CASP9P55211 KRT18P32-201ENST00000424695 1287 ntBASIC14.86□□□□□ -0.03
CASP9P55211 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.86□□□□□ -0.03
CASP9P55211 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.86□□□□□ -0.03
CASP9P55211 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.86□□□□□ -0.03
CASP9P55211 AC093520.2-201ENST00000561830 333 ntBASIC14.86□□□□□ -0.03
CASP9P55211 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.86□□□□□ -0.03
CASP9P55211 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.86□□□□□ -0.03
CASP9P55211 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CASP9P55211 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CASP9P55211 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CASP9P55211 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.86□□□□□ -0.03
CASP9P55211 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CASP9P55211 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP9P55211 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP9P55211 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP9P55211 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CASP9P55211 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.85□□□□□ -0.03
CASP9P55211 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP9P55211 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CASP9P55211 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms