Protein–RNA interactions for Protein: P54849

EMP1, Epithelial membrane protein 1, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1P54849 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
EMP1P54849 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.81□□□□□ -0.52
EMP1P54849 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.81□□□□□ -0.52
EMP1P54849 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.81□□□□□ -0.52
EMP1P54849 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
EMP1P54849 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
EMP1P54849 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
EMP1P54849 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
EMP1P54849 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
EMP1P54849 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
EMP1P54849 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
EMP1P54849 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
EMP1P54849 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.81□□□□□ -0.52
EMP1P54849 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
EMP1P54849 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.81□□□□□ -0.52
EMP1P54849 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.81□□□□□ -0.52
EMP1P54849 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
EMP1P54849 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.81□□□□□ -0.52
EMP1P54849 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 TNRC18P2-201ENST00000417666 2714 ntBASIC11.8□□□□□ -0.52
EMP1P54849 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.8□□□□□ -0.52
EMP1P54849 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.8□□□□□ -0.52
EMP1P54849 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
EMP1P54849 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
EMP1P54849 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
EMP1P54849 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
EMP1P54849 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
EMP1P54849 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.8□□□□□ -0.52
EMP1P54849 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 RNA5SP410-201ENST00000516285 106 ntBASIC11.8□□□□□ -0.52
EMP1P54849 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.8□□□□□ -0.52
EMP1P54849 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
EMP1P54849 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.8□□□□□ -0.52
EMP1P54849 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.8□□□□□ -0.52
EMP1P54849 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.8□□□□□ -0.52
EMP1P54849 AC027612.4-201ENST00000605371 583 ntBASIC11.8□□□□□ -0.52
EMP1P54849 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.8□□□□□ -0.52
EMP1P54849 LINC00628-201ENST00000628516 1289 ntBASIC11.8□□□□□ -0.52
EMP1P54849 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
EMP1P54849 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
EMP1P54849 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.8□□□□□ -0.52
EMP1P54849 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
EMP1P54849 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
EMP1P54849 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
EMP1P54849 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
EMP1P54849 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
EMP1P54849 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
EMP1P54849 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
EMP1P54849 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.79□□□□□ -0.52
EMP1P54849 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.79□□□□□ -0.52
EMP1P54849 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
EMP1P54849 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
EMP1P54849 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
EMP1P54849 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
EMP1P54849 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
EMP1P54849 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
EMP1P54849 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
EMP1P54849 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms