Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6CP51160 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6CP51160 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.96■□□□□ 0.31
PDE6CP51160 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6CP51160 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.96■□□□□ 0.31
PDE6CP51160 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6CP51160 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PDE6CP51160 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDE6CP51160 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDE6CP51160 AZGP1P1-201ENST00000411909 902 ntBASIC16.96■□□□□ 0.31
PDE6CP51160 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PDE6CP51160 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.96■□□□□ 0.31
PDE6CP51160 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.96■□□□□ 0.31
PDE6CP51160 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6CP51160 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.96■□□□□ 0.31
PDE6CP51160 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.96■□□□□ 0.31
PDE6CP51160 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.96■□□□□ 0.31
PDE6CP51160 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.96■□□□□ 0.31
PDE6CP51160 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.96■□□□□ 0.31
PDE6CP51160 AL133215.2-201ENST00000609242 977 ntBASIC16.96■□□□□ 0.31
PDE6CP51160 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.96■□□□□ 0.31
PDE6CP51160 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.96■□□□□ 0.31
PDE6CP51160 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDE6CP51160 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PDE6CP51160 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDE6CP51160 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PDE6CP51160 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDE6CP51160 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDE6CP51160 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.96■□□□□ 0.3
PDE6CP51160 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.96■□□□□ 0.3
PDE6CP51160 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6CP51160 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6CP51160 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6CP51160 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6CP51160 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PDE6CP51160 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PDE6CP51160 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PDE6CP51160 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 RPL37AP1-201ENST00000412502 279 ntBASIC16.95■□□□□ 0.3
PDE6CP51160 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.95■□□□□ 0.3
PDE6CP51160 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.95■□□□□ 0.3
PDE6CP51160 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.95■□□□□ 0.3
PDE6CP51160 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
PDE6CP51160 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PDE6CP51160 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6CP51160 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PDE6CP51160 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6CP51160 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6CP51160 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6CP51160 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6CP51160 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PDE6CP51160 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6CP51160 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.94■□□□□ 0.3
PDE6CP51160 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
PDE6CP51160 BTBD7P1-201ENST00000447253 1453 ntBASIC16.94■□□□□ 0.3
PDE6CP51160 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6CP51160 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.94■□□□□ 0.3
PDE6CP51160 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.94■□□□□ 0.3
PDE6CP51160 AL080243.2-201ENST00000418783 582 ntBASIC16.94■□□□□ 0.3
PDE6CP51160 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6CP51160 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 AC009477.1-201ENST00000452936 217 ntBASIC16.94■□□□□ 0.3
PDE6CP51160 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6CP51160 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.94■□□□□ 0.3
PDE6CP51160 ZNF890P-202ENST00000530367 1156 ntBASIC16.94■□□□□ 0.3
PDE6CP51160 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.94■□□□□ 0.3
PDE6CP51160 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6CP51160 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.94■□□□□ 0.3
PDE6CP51160 AL358472.5-202ENST00000641448 1267 ntBASIC16.94■□□□□ 0.3
PDE6CP51160 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6CP51160 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms