Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPT1AP50416 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.18■□□□□ 0.34
CPT1AP50416 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.18■□□□□ 0.34
CPT1AP50416 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.18■□□□□ 0.34
CPT1AP50416 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
CPT1AP50416 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 NKILA-202ENST00000614771 2598 ntBASIC17.18■□□□□ 0.34
CPT1AP50416 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CPT1AP50416 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.18■□□□□ 0.34
CPT1AP50416 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.18■□□□□ 0.34
CPT1AP50416 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.18■□□□□ 0.34
CPT1AP50416 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CPT1AP50416 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPT1AP50416 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.18■□□□□ 0.34
CPT1AP50416 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CPT1AP50416 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CPT1AP50416 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.18■□□□□ 0.34
CPT1AP50416 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.18■□□□□ 0.34
CPT1AP50416 AC091804.1-201ENST00000486888 567 ntBASIC17.18■□□□□ 0.34
CPT1AP50416 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.18■□□□□ 0.34
CPT1AP50416 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CPT1AP50416 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CPT1AP50416 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.18■□□□□ 0.34
CPT1AP50416 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.18■□□□□ 0.34
CPT1AP50416 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.18■□□□□ 0.34
CPT1AP50416 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.18■□□□□ 0.34
CPT1AP50416 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.18■□□□□ 0.34
CPT1AP50416 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.18■□□□□ 0.34
CPT1AP50416 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPT1AP50416 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.17■□□□□ 0.34
CPT1AP50416 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.17■□□□□ 0.34
CPT1AP50416 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CPT1AP50416 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 PCDHA14-201ENST00000506751 2298 ntBASIC17.17■□□□□ 0.34
CPT1AP50416 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPT1AP50416 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPT1AP50416 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CPT1AP50416 KRT8P14-201ENST00000414254 1442 ntBASIC17.17■□□□□ 0.34
CPT1AP50416 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.17■□□□□ 0.34
CPT1AP50416 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.17■□□□□ 0.34
CPT1AP50416 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CPT1AP50416 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CPT1AP50416 AC079328.2-201ENST00000561241 3354 ntBASIC17.17■□□□□ 0.34
CPT1AP50416 AC007787.1-201ENST00000588095 1583 ntBASIC17.17■□□□□ 0.34
CPT1AP50416 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CPT1AP50416 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.17■□□□□ 0.34
CPT1AP50416 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.17■□□□□ 0.34
CPT1AP50416 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPT1AP50416 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CPT1AP50416 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CPT1AP50416 AC022188.1-201ENST00000620960 1664 ntBASIC17.16■□□□□ 0.34
CPT1AP50416 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPT1AP50416 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms